Bio-Layer Interferometry (BLI) vs Surface Plasmon Resonance (SPR) vs Grating-Coupled Interferometry (GCI) comparison

Which biomolecular interaction techniques are used in research?

Understanding the interaction between molecules – particularly the kinetics – can answer many questions, so it’s no surprise that it needs to be analyzed in many areas of research.

For instance, you may need to know how a molecule interacts with a receptor to understand how signaling occurs in an organism. Or you may want to understand whether, and how tightly, a drug binds to a compound of interest for drug discovery. The binding affinity can tell us this, but we can get more detail from measuring the binding kinetics.

The applications where binding kinetics are relevant, are as broad as the technologies, and several technologies can be used to study them. Here we compare three.

Note: for more information about measuring interactions, thermodynamics and more, please see our ITC technology page. 

[label free 2.png] label free 2.png

What is Biolayer Interferometry?

Biolayer Interferometry (BLI) is an optical, surface-based, label-free technology. Unlike other biosensor technologies, BLI does not work with a microfluidic flow, but by immersion of sensor tips into the sample/buffer. Light reflected off the tip of an optical fiber exhibits a phase shift depending on the refractive index near the tip surface. The reflected light interferes with light reflected off an internal reference surface.

By using white light as a source, a spectral interference pattern is recorded, which comprises information about the refractive index near the tip surface. As biomolecules bind to the biolayer surface immersed in the experimental solution (such as a sample), the refractive index profile and thus the spectral pattern changes.

Advantages

  • Easy to use
  • Virtually clog-free for complex and sticky samples
  • Bulk effects minimized using reference tips

Disadvantages

  • Sensors are orders of magnitude less sensitive than SPR and GCI sensors
  • Limited accuracy when determining kinetic parameters
  • Limited ability to measure tight binders and fast on-rates; measurements limited by diffusion
  • Limited ability to measure fast off-rates

What is Surface Plasmon Resonance?

Surface plasmon resonance (SPR) is another optical, label-free analysis method – in fact, it was one of the first surface-based label-free technologies. SPR detects refractive index changes caused by molecular interactions within an evanescent field near a sensor surface.

In these sensors, a metal film on a glass support is illuminated with light of a specific wavelength. At a specific angle, depending on the refractive index close to the surface, so-called surface plasmons are excited. Since that energy is missing in the reflected light beam, a ‘dip’ in intensity is formed when projecting onto the sensor.

By determining the position of the dip in real-time, SPR measures changes in the refractive index on the metal surface. The solutions containing the analyte are injected using microchannels, and at least one reference flow cell is used for eliminating bulk effects. 

Advantages

  • Reference flow cells eliminate bulk effects
  • Can measure tight binders and fast on-rates

Disadvantages

  • Limited detection of fastest transitions due to use of flow cells in series
  • Traditional microfluidics requires high maintenance due to clogging
  • Limited ability to measure fast off-rates

What is Grating-Coupled Interferometry (GCI)?

Based on waveguide interferometry – another optical label-free method – Grating-Coupled Interferometry (GCI) can monitor and characterize molecular interactions in real-time, determining kinetic rate parameters, affinity constants, and concentrations of analyte molecules interacting with an immobilized ligand.

In waveguide interferometry, changes in refractive index are measured within the evanescent field of a waveguide near a sensor surface. These changes cause the light phase to change too. The light travels throughout the waveguide, creating an evanescent wave that spans the entire length of the sensor surface. The phase changes are displayed interferometrically. Creoptix’s GCI technology takes the benefits of waveguide interferometry and eliminates its typical alignment issues:

Advantages

  • High primary sensitivity for label-free interaction analysis
  • No-clog microfluidics  
  • Can measure tight binders and fast on-rates
  • Can measure kinetics with fast off-rates

[GCI_CX_weblandscape.jpg] GCI_CX_weblandscape.jpg

BLI vs SPR vs GCI: Which biomolecular interaction technique is the best?

The best biomolecular interaction technique will depend on the application and the user’s goals. Below, you can see how these three techniques compare for four key requirements: a broad application range, measurement of weakest binders, measurement of tightest binders, and low system maintenance.

Grating-Coupled Interferometry (GCI)Surface Plasmon Resonance (SPR)Biolayer Interferometry (BLI)
Broadest application range
Suitable for a variety of molecules ranging from low to high molecular weights, purified or crude.
Yes
Suitable for Fragments, Small Molecules, Peptides, Proteins, Viruses, Cell Culture Supernatants, Serums, Cell lysates
No
Suitable for Small Molecules, Peptides (limited suitability for Fragments, Viruses, Cell Culture Supernatants, Serums, Cell lysates)
No
Suitable for Cell Culture Supernatants, Serums, Cell lysates (limited suitability for Peptides, Proteins, Viruses)
Measure weakest binders
Ability to measure kinetics with fast off-rates thanks to fast fluidics and high acquisition rates.
Yes
Off-rates up to kd=10 s-1
No
Off-rates up to kd=1 s-1
No
Off-rates up to kd=0.1 s-1
Measure tightest binders
Ability to accurately measure kinetics even for tight binders and fast on-rates.
Yes
Measurement under flow conditions
Yes
Measurement under flow conditions
No
Measurement under diffusion-limited conditions (no microfluidics)
Less downtime
Little downtime due to service or unexpected repairs.
Yes
No-clog microfluidics
No
Traditional microfluidics
Yes
No microfluidics

Featured products

WAVEsystem

Next-generation bioanalytical instruments for drug discovery and life scien...
WAVEsystem

Related Resources